Description : (at5g62020 : 98.6) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor B2A (HSFB2A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G11660.1); Has 2147 Blast hits to 2134 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 368; Fungi - 473; Plants - 782; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 181.0) & (original description: no original description)
Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00029303-RA | |
Cluster | HCCA clusters: Cluster_143 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_38289 | No alias | heat stress transcription factor a-1 | 0.06 | Orthogroups_2024-Update | |
At3g24520 | No alias | Heat stress transcription factor C-1... | 0.04 | Orthogroups_2024-Update | |
Bradi1g38140 | No alias | heat shock transcription factor C1 | 0.03 | Orthogroups_2024-Update | |
Bradi2g48990 | No alias | heat shock transcription factor C1 | 0.03 | Orthogroups_2024-Update | |
Bradi4g32130 | No alias | heat shock factor 4 | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G090090.4 | No alias | HSF-type transcription factor | 0.04 | Orthogroups_2024-Update | |
Potri.010G104300 | No alias | heat shock transcription factor A8 | 0.03 | Orthogroups_2024-Update | |
Pp1s31_388V6 | No alias | heat shock transcription factor 1 | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
MF | GO:0043565 | sequence-specific DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006720 | isoprenoid metabolic process | IEP | Predicted GO |
BP | GO:0006721 | terpenoid metabolic process | IEP | Predicted GO |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Predicted GO |
MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | Predicted GO |
BP | GO:0016114 | terpenoid biosynthetic process | IEP | Predicted GO |
MF | GO:0016744 | transferase activity, transferring aldehyde or ketonic groups | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000232 | HSF_DNA-bd | 3 | 61 |
No external refs found! |