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  5. PSME_00029374-RA

PSME_00029374-RA


Description : (at2g04160 : 763.0) isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell.; AUXIN-INDUCED IN ROOT CULTURES 3 (AIR3); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to auxin stimulus, lateral root morphogenesis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G59810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1526.0) & (original description: no original description)


Gene families : OG_42_0000006 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00029374-RA
Cluster HCCA clusters: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
402550 No alias Subtilisin-like serine endopeptidase family protein 0.02 Orthogroups_2024-Update
424716 No alias Subtilase family protein 0.02 Orthogroups_2024-Update
A4A49_02479 No alias subtilisin-like protease sbt2.5 0.03 Orthogroups_2024-Update
A4A49_07172 No alias subtilisin-like protease sbt1.9 0.03 Orthogroups_2024-Update
A4A49_41507 No alias subtilisin-like protease sbt1.8 0.03 Orthogroups_2024-Update
At1g20160 No alias CO(2)-response secreted protease... 0.03 Orthogroups_2024-Update
At5g45640 No alias Subtilisin-like serine endopeptidase family protein... 0.03 Orthogroups_2024-Update
At5g59100 No alias Subtilisin-like protease SBT4.4... 0.02 Orthogroups_2024-Update
At5g59190 No alias subtilase family protein [Source:TAIR;Acc:AT5G59190] 0.03 Orthogroups_2024-Update
At5g67360 No alias Subtilisin-like protease SBT1.7... 0.04 Orthogroups_2024-Update
Bradi3g10030 No alias Subtilase family protein 0.02 Orthogroups_2024-Update
Brara.A01195.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.A01843.1 No alias protease *(SBT4) 0.03 Orthogroups_2024-Update
Brara.B01068.1 No alias protease *(SBT5) 0.02 Orthogroups_2024-Update
Brara.J01293.1 No alias protease *(SBT4) 0.03 Orthogroups_2024-Update
GRMZM2G145589 No alias Subtilase family protein 0.02 Orthogroups_2024-Update
Glyma.17G236800 No alias Subtilase family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G089380.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G075230.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G109710.1 No alias protease *(SBT1) 0.02 Orthogroups_2024-Update
LOC_Os04g03100 No alias OsSub35 - Putative Subtilisin homologue, expressed 0.02 Orthogroups_2024-Update
MA_10427681g0010 No alias (at3g14240 : 575.0) Subtilase family protein; FUNCTIONS... 0.04 Orthogroups_2024-Update
MA_10433629g0010 No alias (at5g45650 : 521.0) subtilase family protein; FUNCTIONS... 0.04 Orthogroups_2024-Update
MA_10437060g0020 No alias (at5g67360 : 582.0) Encodes a subtilisin-like serine... 0.03 Orthogroups_2024-Update
MA_18245g0010 No alias (at3g14240 : 887.0) Subtilase family protein; FUNCTIONS... 0.04 Orthogroups_2024-Update
MA_287999g0010 No alias (at5g67360 : 482.0) Encodes a subtilisin-like serine... 0.06 Orthogroups_2024-Update
PSME_00030140-RA No alias (at5g44530 : 364.0) Subtilase family protein; FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00035325-RA No alias (at4g20430 : 793.0) Subtilase family protein; FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.010G196800 No alias Subtilisin-like serine endopeptidase family protein 0.03 Orthogroups_2024-Update
Sobic.002G240700.1 No alias protease *(SBT5) 0.03 Orthogroups_2024-Update
Sobic.009G151000.1 No alias protease *(SBT1) 0.03 Orthogroups_2024-Update
Solyc01g087820 No alias subtilisin-like protease 4B 0.02 Orthogroups_2024-Update
Solyc02g071580 No alias Subtilisin-like protease (AHRD V3.3 *** W9RLB7_9ROSA) 0.04 Orthogroups_2024-Update
Solyc08g079900 No alias subtilisin-like protease 0.04 Orthogroups_2024-Update
Sopen01g034720 No alias Subtilase family 0.02 Orthogroups_2024-Update
Sopen06g022400 No alias Subtilase family 0.02 Orthogroups_2024-Update
Sopen08g028200 No alias Subtilase family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA InterProScan predictions
BP GO:0006508 proteolysis IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR010259 S8pro/Inhibitor_I9 19 98
IPR003137 PA_domain 382 471
IPR000209 Peptidase_S8/S53_dom 133 604
No external refs found!