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  5. PSME_00029450-RA

PSME_00029450-RA


Description : (at1g32300 : 258.0) D-arabinono-1,4-lactone oxidase family protein; FUNCTIONS IN: oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT5G56490.1); Has 2573 Blast hits to 2542 proteins in 768 species: Archae - 19; Bacteria - 1742; Metazoa - 82; Fungi - 220; Plants - 254; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (reliability: 516.0) & (original description: no original description)


Gene families : OG_42_0000298 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00029450-RA
Cluster HCCA clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
411796 No alias D-arabinono-1,4-lactone oxidase family protein 0.02 Orthogroups_2024-Update
77373 No alias D-arabinono-1,4-lactone oxidase family protein 0.02 Orthogroups_2024-Update
MA_39485g0010 No alias (at2g46750 : 207.0) D-arabinono-1,4-lactone oxidase... 0.03 Orthogroups_2024-Update
PSME_00033907-RA No alias (at1g32300 : 380.0) D-arabinono-1,4-lactone oxidase... 0.04 Orthogroups_2024-Update
PSME_00041480-RA No alias (at1g32300 : 115.0) D-arabinono-1,4-lactone oxidase... 0.04 Orthogroups_2024-Update
PSME_00044474-RA No alias (at2g46740 : 125.0) D-arabinono-1,4-lactone oxidase... 0.04 Orthogroups_2024-Update
PSME_00046504-RA No alias (at1g32300 : 282.0) D-arabinono-1,4-lactone oxidase... 0.05 Orthogroups_2024-Update
Potri.018G039600 No alias D-arabinono-1,4-lactone oxidase family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 2 115
No external refs found!