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  5. PSME_00029466-RA

PSME_00029466-RA


Description : (at4g02780 : 394.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o04408|ksa_pea : 378.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (reliability: 788.0) & (original description: no original description)


Gene families : OG_42_0000258 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00029466-RA
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
MA_10435955g0010 No alias (o04408|ksa_pea : 162.0) Ent-kaurene synthase A,... 0.04 Orthogroups_2024-Update
PSME_00003483-RA No alias (p93665|dcs1_goshi : 253.0) (+)-delta-cadinene synthase... 0.04 Orthogroups_2024-Update
PSME_00017295-RA No alias (at4g02780 : 133.0) Catalyzes the conversion of... 0.03 Orthogroups_2024-Update
PSME_00027421-RA No alias (o04408|ksa_pea : 118.0) Ent-kaurene synthase A,... 0.02 Orthogroups_2024-Update
PSME_00039853-RA No alias (at4g02780 : 169.0) Catalyzes the conversion of... 0.03 Orthogroups_2024-Update
Potri.T072900 No alias terpene synthase-like sequence-1,8-cineole 0.05 Orthogroups_2024-Update
Sopen01g048320 No alias Terpene synthase, N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 283 489
IPR005630 Terpene_synthase_metal-bd 532 800
No external refs found!