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PSME_00029599-RA


Description : (at2g32150 : 240.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G02230.2); Has 2392 Blast hits to 2391 proteins in 515 species: Archae - 15; Bacteria - 775; Metazoa - 2; Fungi - 155; Plants - 196; Viruses - 0; Other Eukaryotes - 1249 (source: NCBI BLink). & (reliability: 480.0) & (original description: no original description)


Gene families : OG_42_0000537 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000537_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00029599-RA
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G248900 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Orthogroups_2024-Update
MA_23160g0010 No alias (at5g02230 : 308.0) Haloacid dehalogenase-like hydrolase... 0.05 Orthogroups_2024-Update
Sobic.003G444200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc09g075890 No alias Haloacid dehalogenase-like hydrolase (AHRD V3.3 *** B7FKK9_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!