PSME_00029636-RA

Description : (at5g48940 : 681.0) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93194|rpk1_iponi : 401.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1362.0) & (original description: no original description)

Gene families : OG_42_0000035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00029636-RA
Cluster	HCCA clusters: Cluster_151

Target	Alias	Description	ECC score	Gene Family Method
A4A49_31595	No alias	leucine-rich repeat receptor-like protein kinase tdr	0.03	Orthogroups_2024-Update
A4A49_39903	No alias	receptor-like protein kinase 5	0.02	Orthogroups_2024-Update
Brara.C02577.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Cre07.g319350	No alias	Protein kinase superfamily protein	0.01	Orthogroups_2024-Update
GRMZM2G148702	No alias	Leucine-rich receptor-like protein kinase family protein	0.02	Orthogroups_2024-Update
GRMZM2G313643	No alias	Leucine-rich repeat transmembrane protein kinase	0.03	Orthogroups_2024-Update
GRMZM2G428554	No alias	PEP1 receptor 1	0.03	Orthogroups_2024-Update
Glyma.02G044600	No alias	protein kinase family protein	0.03	Orthogroups_2024-Update
Glyma.04G086700	No alias	Protein kinase family protein with leucine-rich repeat domain	0.03	Orthogroups_2024-Update
Glyma.06G090700	No alias	Leucine-rich repeat transmembrane protein kinase family protein	0.05	Orthogroups_2024-Update
Glyma.06G124200	No alias	Leucine-rich repeat transmembrane protein kinase family protein	0.02	Orthogroups_2024-Update
Glyma.12G206800	No alias	HAESA-like 1	0.06	Orthogroups_2024-Update
Glyma.20G170900	No alias	Leucine-rich receptor-like protein kinase family protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G070040.3	No alias	L-lectin protein kinase & EC_2.7 transferase...	0.05	Orthogroups_2024-Update
LOC_Os06g38990	No alias	receptor-like protein kinase 2 precursor, putative, expressed	0.01	Orthogroups_2024-Update
LOC_Os10g06740	No alias	receptor-like protein kinase precursor, putative, expressed	0.02	Orthogroups_2024-Update
MA_45540g0010	No alias	(at5g41730 : 176.0) Protein kinase family protein;...	0.03	Orthogroups_2024-Update
MA_944190g0010	No alias	(at5g25930 : 721.0) Protein kinase family protein with...	0.04	Orthogroups_2024-Update
PSME_00002542-RA	No alias	(at5g25930 : 602.0) Protein kinase family protein with...	0.03	Orthogroups_2024-Update
PSME_00028163-RA	No alias	(at5g49660 : 349.0) Leucine-rich repeat transmembrane...	0.02	Orthogroups_2024-Update
Potri.004G049100	No alias	HAESA-like 1	0.02	Orthogroups_2024-Update
Potri.005G198000	No alias	Leucine-rich receptor-like protein kinase family protein	0.02	Orthogroups_2024-Update
Potri.008G009300	No alias	PEP1 receptor 1	0.02	Orthogroups_2024-Update
Potri.017G016600	No alias	HAESA-like 1	0.02	Orthogroups_2024-Update
Seita.1G118600.1	No alias	LRR-Xb protein kinase & pythosulfokine peptide receptor...	0.02	Orthogroups_2024-Update
Seita.1G152400.1	No alias	L-lectin protein kinase & EC_2.7 transferase...	0.03	Orthogroups_2024-Update
Seita.2G177600.1	No alias	LRR-XI protein kinase & IDA/IDL-peptide receptor kinase...	0.03	Orthogroups_2024-Update
Sobic.002G308200.1	No alias	LRR-XI protein kinase & CIF/TWS1-peptide receptor *(GSO)...	0.04	Orthogroups_2024-Update
Sopen00g008200	No alias	Protein kinase domain	0.02	Orthogroups_2024-Update
Sopen04g030680	No alias	Protein kinase domain	0.02	Orthogroups_2024-Update
Sopen05g003190	No alias	Leucine Rich repeats (2 copies)	0.02	Orthogroups_2024-Update
Sopen08g020090	No alias	Protein kinase domain	0.02	Orthogroups_2024-Update
Sopen09g028600	No alias	Leucine Rich repeats (2 copies)	0.03	Orthogroups_2024-Update
Sopen09g034340	No alias	Leucine rich repeat	0.02	Orthogroups_2024-Update
Sopen11g021050	No alias	Protein kinase domain	0.03	Orthogroups_2024-Update
evm.model.tig00020918.12	No alias	(at1g67890 : 126.0) PAS domain-containing protein...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
MF	GO:0009055	electron transfer activity	IEP	Predicted GO
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0009250	glucan biosynthetic process	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016759	cellulose synthase activity	IEP	Predicted GO
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predicted GO
BP	GO:0030243	cellulose metabolic process	IEP	Predicted GO
BP	GO:0030244	cellulose biosynthetic process	IEP	Predicted GO
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predicted GO
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predicted GO
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044249	cellular biosynthetic process	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
BP	GO:0051273	beta-glucan metabolic process	IEP	Predicted GO
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR025875	Leu-rich_rpt_4	278	320
IPR000719	Prot_kinase_dom	532	798
IPR013210	LRR_N_plant-typ	46	81

External Links

No external refs found!

PSME_00029636-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation