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  5. PSME_00029664-RA

PSME_00029664-RA


Description : (at3g43300 : 597.0) AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome.; HOPM interactor 7 (ATMIN7); CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT1G01960.1). & (reliability: 1194.0) & (original description: no original description)


Gene families : OG_42_0000974 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000974_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00029664-RA
Cluster HCCA clusters: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
Kfl00174_0120 kfl00174_0120_v1.1 (at3g43300 : 1318.0) AtMIN7 is an immunity associated... 0.01 Orthogroups_2024-Update
Kfl00714_0050 kfl00714_0050_v1.1 (at3g60860 : 1621.0) SEC7-like guanine nucleotide... 0.01 Orthogroups_2024-Update
LOC_Os06g41780 No alias guanine nucleotide exchange family protein, putative, expressed 0.02 Orthogroups_2024-Update
Sopen01g054440 No alias Sec7 domain 0.02 Orthogroups_2024-Update
evm.model.tig00000852.23 No alias (at3g43300 : 543.0) AtMIN7 is an immunity associated... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR015403 Sec7_C 168 210
IPR015216 SANTA 548 609
No external refs found!