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  5. PSME_00029841-RA

PSME_00029841-RA


Description : (at5g41460 : 466.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 932.0) & (original description: no original description)


Gene families : OG_42_0000161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000161_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00029841-RA
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
A4A49_10409 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_17603 No alias hypothetical protein 0.04 Orthogroups_2024-Update
At1g05280 No alias Protein of unknown function (DUF604) [Source:TAIR;Acc:AT1G05280] 0.04 Orthogroups_2024-Update
Brara.A03409.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B02563.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.C03364.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.C04687.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D01146.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E02937.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I02342.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.J00348.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.J00349.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G061202 No alias Protein of unknown function (DUF604) 0.02 Orthogroups_2024-Update
Glyma.07G067500 No alias Protein of unknown function (DUF604) 0.03 Orthogroups_2024-Update
Glyma.09G256300 No alias Protein of unknown function (DUF604) 0.03 Orthogroups_2024-Update
Glyma.11G221600 No alias Protein of unknown function (DUF604) 0.02 Orthogroups_2024-Update
Glyma.13G306200 No alias Protein of unknown function (DUF604) 0.03 Orthogroups_2024-Update
Glyma.13G330300 No alias Protein of unknown function (DUF604) 0.04 Orthogroups_2024-Update
Glyma.18G035900 No alias Protein of unknown function (DUF604) 0.06 Orthogroups_2024-Update
HORVU1Hr1G035090.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G026980.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G100940.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G093770.3 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_66888g0010 No alias (at2g37730 : 394.0) Protein of unknown function... 0.02 Orthogroups_2024-Update
Potri.001G100700 No alias Protein of unknown function (DUF604) 0.03 Orthogroups_2024-Update
Pp1s149_250V6 No alias MYC6.16; fringe-related protein [Arabidopsis thaliana] 0.06 Orthogroups_2024-Update
Seita.9G343400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g052650 No alias transferring glycosyl group transferase (DUF604) (AHRD... 0.03 Orthogroups_2024-Update
Solyc11g065450 No alias LOW QUALITY:transferring glycosyl group transferase... 0.03 Orthogroups_2024-Update
Solyc11g065470 No alias transferring glycosyl group transferase (DUF604) (AHRD... 0.03 Orthogroups_2024-Update
Sopen11g025180 No alias Protein of unknown function, DUF604 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006740 DUF604 209 466
No external refs found!