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  5. PSME_00029842-RA

PSME_00029842-RA


Description : (at5g41460 : 477.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 954.0) & (original description: no original description)


Gene families : OG_42_0000161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000161_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00029842-RA

Target Alias Description ECC score Gene Family Method Actions
At1g33250 No alias Beta-1,3-n-acetylglucosaminyltransferase radical fringe... 0.01 Orthogroups_2024-Update
At4g23490 No alias At4g23490/F16G20_190 [Source:UniProtKB/TrEMBL;Acc:Q8H0S2] 0.03 Orthogroups_2024-Update
Brara.C04687.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.D01146.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Brara.I02705.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Brara.J00348.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Brara.J00349.1 No alias Unknown function 0.01 Orthogroups_2024-Update
GRMZM2G061202 No alias Protein of unknown function (DUF604) 0.01 Orthogroups_2024-Update
LOC_Os03g03270 No alias fringe-related protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00019080-RA No alias (at5g41460 : 468.0) Protein of unknown function... 0.01 Orthogroups_2024-Update
PSME_00019635-RA No alias (at1g01570 : 157.0) FUNCTIONS IN: transferase activity,... 0.01 Orthogroups_2024-Update
PSME_00042987-RA No alias (at1g33250 : 124.0) Protein of unknown function... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR006740 DUF604 223 480
No external refs found!