PSME_00030014-RA

Description : (at3g01970 : 113.0) member of WRKY Transcription Factor; Group I; WRKY DNA-binding protein 45 (WRKY45); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 75 (TAIR:AT5G13080.1); Has 3497 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3482; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description)

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00030014-RA

Target	Alias	Description	ECC score	Gene Family Method
A4A49_09474	No alias	putative wrky transcription factor 20	0.04	Orthogroups_2024-Update
A4A49_10325	No alias	putative wrky transcription factor 40	0.02	Orthogroups_2024-Update
A4A49_16192	No alias	putative wrky transcription factor 29	0.02	Orthogroups_2024-Update
A4A49_23174	No alias	putative wrky transcription factor 41	0.03	Orthogroups_2024-Update
A4A49_24743	No alias	putative wrky transcription factor 20	0.01	Orthogroups_2024-Update
At4g31800	No alias	WRKY like transcription factor...	0.02	Orthogroups_2024-Update
Bradi4g28280	No alias	WRKY DNA-binding protein 46	0.03	Orthogroups_2024-Update
Brara.B02390.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C00649.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I05026.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G025895	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G139815	No alias	WRKY DNA-binding protein 30	0.02	Orthogroups_2024-Update
Glyma.01G222300	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.08G078700	No alias	WRKY DNA-binding protein 14	0.03	Orthogroups_2024-Update
Glyma.08G218600	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
Glyma.12G212300	No alias	WRKY DNA-binding protein 69	0.03	Orthogroups_2024-Update
Glyma.19G217800	No alias	WRKY DNA-binding protein 23	0.03	Orthogroups_2024-Update
LOC_Os01g53260	No alias	WRKY23, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g63810	No alias	WRKY80, expressed	0.02	Orthogroups_2024-Update
MA_179641g0010	No alias	(at1g29860 : 118.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_496691g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_7513437g0010	No alias	(at5g26170 : 113.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_93790g0010	No alias	(at1g29860 : 110.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00016606-RA	No alias	(at1g62300 : 138.0) Encodes a transcription factor...	0.05	Orthogroups_2024-Update
PSME_00035158-RA	No alias	(at3g01970 : 114.0) member of WRKY Transcription Factor;...	0.06	Orthogroups_2024-Update
Potri.015G064100	No alias	WRKY DNA-binding protein 72	0.02	Orthogroups_2024-Update
Seita.2G157800.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.5G378000.1	No alias	WRKY-type transcription factor	0.06	Orthogroups_2024-Update
Seita.5G468400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G174200.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G202700.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G199400.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.009G212800.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Solyc02g072190	No alias	WRKY transcription factor 79	0.03	Orthogroups_2024-Update
Solyc05g015850	No alias	WRKY transcription factor 75	0.02	Orthogroups_2024-Update
Sopen04g028240	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen08g021290	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update
Sopen08g029910	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
BP	GO:0006811	ion transport	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Predicted GO
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predicted GO
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Predicted GO
BP	GO:0030001	metal ion transport	IEP	Predicted GO
MF	GO:0051536	iron-sulfur cluster binding	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO
MF	GO:0051540	metal cluster binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	131	188

External Links

No external refs found!

PSME_00030014-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation