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Description : (at1g28320 : 434.0) Mutants in this gene are defective in the processing of pre-glyoxysomal malate dehydrogenase (pre-gMDH) to gMDH.; DEG15; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003); BEST Arabidopsis thaliana protein match is: DegP protease 1 (TAIR:AT3G27925.1); Has 3917 Blast hits to 3716 proteins in 1340 species: Archae - 34; Bacteria - 3021; Metazoa - 72; Fungi - 16; Plants - 139; Viruses - 0; Other Eukaryotes - 635 (source: NCBI BLink). & (reliability: 868.0) & (original description: no original description)
Gene families : OG_42_0006986 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006986_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00030264-RA | |
| Cluster | HCCA clusters: Cluster_231 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_27955 | No alias | glyoxysomal processing protease, glyoxysomal | 0.02 | Orthogroups_2024-Update | |
| LOC_Os12g41430 | No alias | expressed protein | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Predicted GO |
| MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006189 | 'de novo' IMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| MF | GO:0008289 | lipid binding | IEP | Predicted GO |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Predicted GO |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
| MF | GO:0015923 | mannosidase activity | IEP | Predicted GO |
| MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| BP | GO:0016458 | gene silencing | IEP | Predicted GO |
| BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
| BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |