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  5. PSME_00030276-RA

PSME_00030276-RA


Description : (at5g19740 : 583.0) Peptidase M28 family protein; FUNCTIONS IN: dipeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Transferrin receptor-like, dimerisation (InterPro:IPR007365), Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Peptidase M28 family protein (TAIR:AT3G54720.1); Has 3567 Blast hits to 3525 proteins in 555 species: Archae - 24; Bacteria - 1302; Metazoa - 657; Fungi - 527; Plants - 315; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink). & (reliability: 1166.0) & (original description: no original description)


Gene families : OG_42_0001802 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001802_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030276-RA
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Bradi2g49361 No alias Peptidase M28 family protein 0.03 Orthogroups_2024-Update
Brara.D00445.1 No alias M28-class carboxypeptidase & EC_3.4 hydrolase acting on... 0.03 Orthogroups_2024-Update
GRMZM2G159171 No alias Peptidase M28 family protein 0.04 Orthogroups_2024-Update
Glyma.03G205900 No alias Peptidase M28 family protein 0.03 Orthogroups_2024-Update
Potri.016G064300 No alias Peptidase M28 family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007365 TFR-like_dimer_dom 672 726
IPR007484 Peptidase_M28 394 583
IPR003137 PA_domain 212 298
No external refs found!