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  5. PSME_00030325-RA

PSME_00030325-RA


Description : (at3g54830 : 268.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G39130.1); Has 4642 Blast hits to 4638 proteins in 371 species: Archae - 12; Bacteria - 272; Metazoa - 1629; Fungi - 958; Plants - 1130; Viruses - 3; Other Eukaryotes - 638 (source: NCBI BLink). & (reliability: 536.0) & (original description: no original description)


Gene families : OG_42_0000219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030325-RA
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
At2g41190 No alias Amino acid transporter AVT1A... 0.03 Orthogroups_2024-Update
Glyma.11G252400 No alias Transmembrane amino acid transporter family protein 0.04 Orthogroups_2024-Update
Glyma.19G130500 No alias Transmembrane amino acid transporter family protein 0.03 Orthogroups_2024-Update
LOC_Os02g01100 No alias transmembrane amino acid transporter protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.008G086500 No alias Transmembrane amino acid transporter family protein 0.03 Orthogroups_2024-Update
Solyc03g063030 No alias Transmembrane amino acid transporter family protein... 0.03 Orthogroups_2024-Update
Solyc03g063040 No alias Amino acid transporter family protein (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc03g063050 No alias Amino acid transporter, putative (AHRD V3.3 *** B9SY73_RICCO) 0.02 Orthogroups_2024-Update
Sopen03g010380 No alias Transmembrane amino acid transporter protein 0.03 Orthogroups_2024-Update
Sopen11g004230 No alias Transmembrane amino acid transporter protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 131 358
No external refs found!