PSME_00030410-RA

Description : (at3g17630 : 314.0) member of Putative Na+/H+ antiporter family; cation/H+ exchanger 19 (CHX19); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10353 Blast hits to 10313 proteins in 2156 species: Archae - 388; Bacteria - 8084; Metazoa - 59; Fungi - 214; Plants - 674; Viruses - 0; Other Eukaryotes - 934 (source: NCBI BLink). & (reliability: 628.0) & (original description: no original description)

Gene families : OG_42_0000316 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000316_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00030410-RA
Cluster	HCCA clusters: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
At2g28170	No alias	Cation/H(+) antiporter 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUV9]	0.04	Orthogroups_2024-Update
Kfl00257_0080	kfl00257_0080_v1.1	(at5g41610 : 438.0) member of Putative Na+/H+ antiporter...	0.01	Orthogroups_2024-Update
PSME_00009262-RA	No alias	(at3g17630 : 267.0) member of Putative Na+/H+ antiporter...	0.06	Orthogroups_2024-Update
evm.model.tig00000113.54	No alias	(at3g17630 : 167.0) member of Putative Na+/H+ antiporter...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015297	antiporter activity	None	Extended
MF	GO:0015298	solute:cation antiporter activity	None	Extended
MF	GO:0015299	solute:proton antiporter activity	IEA	InterProScan predictions
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Predicted GO
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Predicted GO
MF	GO:0016859	cis-trans isomerase activity	IEP	Predicted GO
BP	GO:0018193	peptidyl-amino acid modification	IEP	Predicted GO
BP	GO:0018208	peptidyl-proline modification	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006153	Cation/H_exchanger	4	217

External Links

No external refs found!

PSME_00030410-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation