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  5. PSME_00030519-RA

PSME_00030519-RA


Description : (at1g74890 : 164.0) Encodes a nuclear response regulator that acts as a negative regulator in cytokinin-mediated signal transduction. Transcript accumulates in leaves and roots in response to cytokinin treatment.; response regulator 15 (ARR15); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 7 (TAIR:AT1G19050.1); Has 46084 Blast hits to 45371 proteins in 2654 species: Archae - 273; Bacteria - 40324; Metazoa - 30; Fungi - 580; Plants - 1499; Viruses - 4; Other Eukaryotes - 3374 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description)


Gene families : OG_42_0000253 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030519-RA
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Bradi3g60557 No alias response regulator 9 0.03 Orthogroups_2024-Update
Glyma.01G037500 No alias response regulator 3 0.03 Orthogroups_2024-Update
LOC_Os08g28900 No alias OsRR8 type-A response regulator, expressed 0.03 Orthogroups_2024-Update
PSME_00021491-RA No alias (at3g56380 : 102.0) response regulator 17; response... 0.04 Orthogroups_2024-Update
Potri.001G027000 No alias response regulator 9 0.02 Orthogroups_2024-Update
Seita.3G019000.1 No alias A-type ARR response regulator of cytokinin signalling 0.04 Orthogroups_2024-Update
Seita.8G027100.1 No alias A-type ARR response regulator of cytokinin signalling 0.06 Orthogroups_2024-Update
Sobic.006G263300.1 No alias A-type ARR response regulator of cytokinin signalling 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 36 152
No external refs found!