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  5. PSME_00030544-RA

PSME_00030544-RA


Description : (at4g20140 : 307.0) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink). & (p93194|rpk1_iponi : 231.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 614.0) & (original description: no original description)


Gene families : OG_42_0001209 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030544-RA

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g58080 No alias polygalacturonase inhibitor 3 precursor, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 529 589
IPR001611 Leu-rich_rpt 366 423
IPR001611 Leu-rich_rpt 862 921
IPR001611 Leu-rich_rpt 293 353
IPR001611 Leu-rich_rpt 102 162
IPR013210 LRR_N_plant-typ 217 256
IPR001611 Leu-rich_rpt 978 1000
IPR001611 Leu-rich_rpt 1026 1047
IPR001611 Leu-rich_rpt 718 739
No external refs found!