1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00030631-RA

PSME_00030631-RA


Description : (at4g39230 : 275.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (p52578|ifrh_soltu : 275.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (reliability: 550.0) & (original description: no original description)


Gene families : OG_42_0000162 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030631-RA
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
A4A49_09977 No alias isoflavone reductase-like a622 0.05 Orthogroups_2024-Update
At1g75280 No alias Isoflavone reductase homolog P3... 0.03 Orthogroups_2024-Update
Brara.E01741.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor 0.04 Orthogroups_2024-Update
Brara.G03341.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 Orthogroups_2024-Update
Glyma.06G012100 No alias NmrA-like negative transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.06G317000 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G211600 No alias pinoresinol reductase 1 0.01 Orthogroups_2024-Update
Glyma.11G070600 No alias NmrA-like negative transcriptional regulator family protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G075160.4 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 Orthogroups_2024-Update
MA_10181288g0010 No alias (at1g75290 : 233.0) encodes a protein whose sequence is... 0.05 Orthogroups_2024-Update
MA_16892g0010 No alias (at1g75280 : 254.0) isoflavone reductase, putative,... 0.04 Orthogroups_2024-Update
MA_17102g0020 No alias (at4g39230 : 382.0) encodes a protein whose sequence is... 0.03 Orthogroups_2024-Update
MA_180665g0010 No alias (p52578|ifrh_soltu : 241.0) Isoflavone reductase homolog... 0.03 Orthogroups_2024-Update
MA_43637g0010 No alias (at4g13660 : 385.0) Encodes a pinoresinol reductase... 0.05 Orthogroups_2024-Update
MA_7866760g0010 No alias (p52579|ifrh_tobac : 216.0) Isoflavone reductase homolog... 0.05 Orthogroups_2024-Update
PSME_00003235-RA No alias (p52579|ifrh_tobac : 315.0) Isoflavone reductase homolog... 0.05 Orthogroups_2024-Update
PSME_00034365-RA No alias (p52578|ifrh_soltu : 269.0) Isoflavone reductase homolog... 0.08 Orthogroups_2024-Update
PSME_00045113-RA No alias (at4g39230 : 265.0) encodes a protein whose sequence is... 0.03 Orthogroups_2024-Update
Potri.009G118100 No alias NmrA-like negative transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Potri.013G103700 No alias NmrA-like negative transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Potri.013G103900 No alias NmrA-like negative transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Seita.5G070300.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 Orthogroups_2024-Update
Seita.5G071100.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.01 Orthogroups_2024-Update
Sobic.003G241300.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR008030 NmrA-like 5 238
No external refs found!