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  5. PSME_00030639-RA

PSME_00030639-RA


Description : (at4g36220 : 265.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 261.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (reliability: 530.0) & (original description: no original description)


Gene families : OG_42_0000031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030639-RA
Cluster HCCA clusters: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
113134 No alias Cytochrome P450 superfamily protein 0.02 Orthogroups_2024-Update
115322 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
115634 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
124314 No alias Cytochrome P450 superfamily protein 0.02 Orthogroups_2024-Update
126936 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
421431 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
90567 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
A4A49_31207 No alias flavonoid 3'-monooxygenase 0.02 Orthogroups_2024-Update
Bradi1g57000 No alias Cytochrome P450 superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G102079 No alias Cytochrome P450 superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G133720 No alias cytochrome P450, family 71, subfamily A, polypeptide 25 0.02 Orthogroups_2024-Update
Glyma.05G042800 No alias cytochrome P450, family 71 subfamily B, polypeptide 7 0.03 Orthogroups_2024-Update
Glyma.07G089900 No alias cytochrome P450, family 71, subfamily A, polypeptide 22 0.03 Orthogroups_2024-Update
Glyma.16G195500 No alias cytochrome P450, family 71, subfamily A, polypeptide 26 0.03 Orthogroups_2024-Update
HORVU3Hr1G031020.2 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
HORVU5Hr1G061340.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
LOC_Os03g44740 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g43910 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g16720 No alias cytochrome P450 71A1, putative, expressed 0.02 Orthogroups_2024-Update
MA_10430254g0010 No alias (q9sbq9|f3ph_pethy : 482.0) Flavonoid 3'-monooxygenase... 0.03 Orthogroups_2024-Update
MA_10433066g0010 No alias "(at5g06900 : 236.0) member of CYP93D; ""cytochrome... 0.03 Orthogroups_2024-Update
MA_10435850g0010 No alias (at4g36220 : 394.0) encodes ferulate 5-hydroxylase... 0.03 Orthogroups_2024-Update
MA_158072g0010 No alias (q9sbq9|f3ph_pethy : 420.0) Flavonoid 3'-monooxygenase... 0.03 Orthogroups_2024-Update
MA_19517g0010 No alias (at4g36220 : 367.0) encodes ferulate 5-hydroxylase... 0.05 Orthogroups_2024-Update
MA_9169998g0010 No alias (at5g07990 : 367.0) Required for flavonoid 3'... 0.02 Orthogroups_2024-Update
Mp3g09970.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.03 Orthogroups_2024-Update
Mp3g14440.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.03 Orthogroups_2024-Update
PSME_00010798-RA No alias "(at3g48280 : 398.0) putative cytochrome P450;... 0.03 Orthogroups_2024-Update
PSME_00013671-RA No alias (o81970|c71a9_soybn : 380.0) Cytochrome P450 71A9 (EC... 0.03 Orthogroups_2024-Update
PSME_00018724-RA No alias (at5g07990 : 376.0) Required for flavonoid 3'... 0.02 Orthogroups_2024-Update
PSME_00024895-RA No alias (at5g07990 : 380.0) Required for flavonoid 3'... 0.03 Orthogroups_2024-Update
PSME_00049088-RA No alias (q9sbq9|f3ph_pethy : 380.0) Flavonoid 3'-monooxygenase... 0.03 Orthogroups_2024-Update
PSME_00053119-RA No alias (o48923|c71da_soybn : 379.0) Cytochrome P450 71D10 (EC... 0.05 Orthogroups_2024-Update
PSME_00054646-RA No alias (at5g07990 : 386.0) Required for flavonoid 3'... 0.03 Orthogroups_2024-Update
PSME_00056320-RA No alias "(at3g48290 : 172.0) putative cytochrome P450;... 0.05 Orthogroups_2024-Update
Potri.001G167900 No alias Cytochrome P450 superfamily protein 0.02 Orthogroups_2024-Update
Pp1s163_33V6 No alias flavonoid 3-monooxygenase 0.03 Orthogroups_2024-Update
Pp1s262_17V6 No alias cytochrome p450 0.03 Orthogroups_2024-Update
Pp1s68_92V6 No alias flavonoid 3 -hydroxylase 0.03 Orthogroups_2024-Update
Pp1s91_192V6 No alias cytochrome p450 0.03 Orthogroups_2024-Update
Seita.2G038800.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Seita.6G057600.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.002G040400.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sopen03g031130 No alias Cytochrome P450 0.02 Orthogroups_2024-Update
Sopen03g034260 No alias Cytochrome P450 0.03 Orthogroups_2024-Update
Sopen04g027810 No alias Cytochrome P450 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001128 Cyt_P450 1 132
IPR001128 Cyt_P450 145 326
No external refs found!