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  5. PSME_00030640-RA

PSME_00030640-RA


Description : (at2g39220 : 399.0) PATATIN-like protein 6 (PLP6); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: patatin-like protein 6 (TAIR:AT3G54950.1); Has 1294 Blast hits to 1292 proteins in 232 species: Archae - 0; Bacteria - 327; Metazoa - 139; Fungi - 43; Plants - 635; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (p15478|pat5_soltu : 147.0) Patatin T5 precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (reliability: 798.0) & (original description: no original description)


Gene families : OG_42_0000819 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000819_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030640-RA
Cluster HCCA clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
A4A49_07774 No alias putative inactive patatin-like protein 9 0.02 Orthogroups_2024-Update
Brara.I03760.1 No alias phospholipase-A2 *(pPLA2-III)) 0.03 Orthogroups_2024-Update
Glyma.20G179600 No alias PATATIN-like protein 6 0.02 Orthogroups_2024-Update
MA_1798720g0010 No alias (at2g39220 : 157.0) PATATIN-like protein 6 (PLP6);... 0.03 Orthogroups_2024-Update
MA_233378g0010 No alias (at2g39220 : 191.0) PATATIN-like protein 6 (PLP6);... 0.03 Orthogroups_2024-Update
PSME_00054915-RA No alias (at2g39220 : 406.0) PATATIN-like protein 6 (PLP6);... 0.01 Orthogroups_2024-Update
Seita.9G466200.1 No alias phospholipase-A2 *(pPLA2-III)) 0.01 Orthogroups_2024-Update
Sobic.001G157700.1 No alias phospholipase-A2 *(pPLA2-III)) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009653 anatomical structure morphogenesis IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0032989 cellular component morphogenesis IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048869 cellular developmental process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR002641 PNPLA_dom 55 260
No external refs found!