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  5. PSME_00030746-RA

PSME_00030746-RA


Description : (at3g52280 : 179.0) Bromodomain containing nuclear-localized protein involved in leaf development. GTE6 binds to the promoter and intron of AS1 and regulates its expression via histone acetylation.; general transcription factor group E6 (GTE6); FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: Transcription factor GTE6 (TAIR:AT2G34900.1). & (reliability: 358.0) & (original description: no original description)


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030746-RA
Cluster HCCA clusters: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Solyc02g093880 No alias Transcription factor GTE8 (AHRD V3.3 *** A0A0B2PTJ0_GLYSO) 0.03 Orthogroups_2024-Update
evm.model.contig_2143.3 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.contig_3490.12 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027353 NET_dom 255 316
IPR001487 Bromodomain 133 188
No external refs found!