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  5. PSME_00030815-RA

PSME_00030815-RA


Description : (at1g09540 : 235.0) Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size.; myb domain protein 61 (MYB61); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8976 Blast hits to 8269 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 766; Fungi - 514; Plants - 5880; Viruses - 4; Other Eukaryotes - 1812 (source: NCBI BLink). & (p20027|myb3_horvu : 199.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 470.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030815-RA
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
84195 No alias myb domain protein 61 0.04 Orthogroups_2024-Update
A4A49_01152 No alias transcription factor myb36 0.03 Orthogroups_2024-Update
A4A49_20993 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_26356 No alias transcription factor myb21 0.02 Orthogroups_2024-Update
AC206901.3_FG005 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
At1g06180 No alias Transcription factor MYB13... 0.03 Orthogroups_2024-Update
At1g66230 No alias Transcription factor MYB20... 0.03 Orthogroups_2024-Update
At2g26950 No alias Transcription factor MYB104... 0.03 Orthogroups_2024-Update
Bradi1g64687 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
Bradi2g11676 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
Bradi2g40620 No alias myb domain protein 86 0.02 Orthogroups_2024-Update
Bradi2g62510 No alias myb domain protein 59 0.03 Orthogroups_2024-Update
Bradi3g17165 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.03 Orthogroups_2024-Update
Bradi3g48886 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Bradi3g49180 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Bradi4g04627 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Bradi4g09900 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Bradi4g30220 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Brara.A01271.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.B00568.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
Brara.B02106.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B03345.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Brara.B03505.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.B03738.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D02243.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Brara.F01822.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.G01033.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Brara.H02857.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Brara.I00351.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.K01834.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G005066 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
GRMZM2G051528 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
GRMZM2G104551 No alias myb domain protein 42 0.02 Orthogroups_2024-Update
GRMZM2G143046 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
GRMZM2G160838 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
GRMZM2G176327 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Glyma.01G222200 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Glyma.03G183900 No alias myb domain protein 68 0.03 Orthogroups_2024-Update
Glyma.03G250600 No alias myb domain protein 15 0.05 Orthogroups_2024-Update
Glyma.04G170100 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.07G242600 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.08G336500 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Glyma.11G009400 No alias myb domain protein 107 0.04 Orthogroups_2024-Update
Glyma.11G194100 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.13G050400 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.13G063200 No alias myb domain protein 30 0.04 Orthogroups_2024-Update
Glyma.14G090900 No alias myb domain protein 84 0.05 Orthogroups_2024-Update
Glyma.16G007200 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Glyma.16G189400 No alias myb domain protein 18 0.03 Orthogroups_2024-Update
Glyma.19G022100 No alias myb domain protein 30 0.03 Orthogroups_2024-Update
Glyma.19G164600 No alias myb domain protein 15 0.06 Orthogroups_2024-Update
Glyma.19G222200 No alias myb domain protein 55 0.03 Orthogroups_2024-Update
Glyma.19G257400 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.20G158100 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.20G209700 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
HORVU2Hr1G027600.2 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G116740.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
HORVU4Hr1G054420.3 No alias MYB class-R2R3 subgroup-7 transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G045550.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G098540.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G060600.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G072450.2 No alias MYB class-R2R3 transcription factor & MYB class-R2R3... 0.04 Orthogroups_2024-Update
LOC_Os01g49160 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g46780 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g25550 No alias myb-like DNA-binding domain containing protein,... 0.03 Orthogroups_2024-Update
LOC_Os04g43680 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g43580 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g43550 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g36250 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g35660 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g35390 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g47460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10157944g0010 No alias (p20026|myb1_horvu : 261.0) Myb-related protein Hv1 -... 0.03 Orthogroups_2024-Update
MA_10430220g0010 No alias (at3g23250 : 216.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_1201g0010 No alias (q7xbh4|myb4_orysa : 213.0) Myb-related protein Myb4... 0.03 Orthogroups_2024-Update
MA_128244g0010 No alias (at3g61250 : 275.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_175772g0010 No alias (at1g22640 : 206.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
MA_199974g0010 No alias (at4g38620 : 266.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
MA_20462g0010 No alias (at2g32460 : 219.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_23242g0010 No alias (at1g22640 : 201.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
MA_2797g0010 No alias (at4g38620 : 271.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
MA_66255g0010 No alias (at5g15310 : 261.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00010370-RA No alias (at5g62470 : 192.0) Encodes a R2R3 type Myb... 0.04 Orthogroups_2024-Update
PSME_00021697-RA No alias (at5g15310 : 302.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00026452-RA No alias (at3g61250 : 251.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00035305-RA No alias (at5g57620 : 219.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00050636-RA No alias (p20025|myb38_maize : 262.0) Myb-related protein Zm38 -... 0.04 Orthogroups_2024-Update
PSME_00051767-RA No alias (at4g38620 : 243.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
PSME_00051920-RA No alias (at5g57620 : 234.0) Encodes a putative transcription... 0.05 Orthogroups_2024-Update
Potri.001G086700 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Potri.001G099800 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Potri.001G408700 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Potri.003G114100 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Potri.003G132000 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Potri.005G001600 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
Potri.005G096600 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Potri.005G164900 No alias myb domain protein 93 0.04 Orthogroups_2024-Update
Potri.009G053900 No alias myb domain protein 46 0.04 Orthogroups_2024-Update
Potri.010G141000 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Potri.010G165700 No alias myb domain protein 106 0.03 Orthogroups_2024-Update
Potri.017G099500 No alias myb domain protein 121 0.03 Orthogroups_2024-Update
Potri.018G127700 No alias myb domain protein 82 0.02 Orthogroups_2024-Update
Potri.019G018200 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Pp1s106_216V6 No alias atmyb16 (myb domain protein 16) dna binding transcription factor 0.04 Orthogroups_2024-Update
Pp1s284_57V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s2_60V6 No alias myb transcription factor 0.02 Orthogroups_2024-Update
Seita.3G333800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G350800.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Seita.4G086300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G115200.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G167300.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
Seita.8G244100.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.9G222100.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G209300.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G219800.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G303600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.03 Orthogroups_2024-Update
Sobic.009G016633.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Solyc01g010910 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRK4_SALMI) 0.03 Orthogroups_2024-Update
Solyc01g087130 No alias R2R3MYB transcription factor 47 0.03 Orthogroups_2024-Update
Solyc02g086690 No alias Myb-related protein (AHRD V3.3 *-* A0A0B0P535_GOSAR) 0.03 Orthogroups_2024-Update
Solyc03g005570 No alias MYB family protein (AHRD V3.3 *** A0A067KW19_JATCU) 0.03 Orthogroups_2024-Update
Solyc05g007710 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRS5_SALMI) 0.03 Orthogroups_2024-Update
Solyc05g008250 No alias R2R3MYB transcription factor 76 0.03 Orthogroups_2024-Update
Solyc11g065840 No alias R2R3MYB transcription factor 46 0.03 Orthogroups_2024-Update
Sopen02g031450 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen02g032880 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen06g031320 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen10g025190 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 110
No external refs found!