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  5. PSME_00030827-RA

PSME_00030827-RA


Description : (at4g26200 : 568.0) Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.; 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 8 (TAIR:AT4G37770.1); Has 33519 Blast hits to 33516 proteins in 2975 species: Archae - 937; Bacteria - 23616; Metazoa - 672; Fungi - 820; Plants - 1333; Viruses - 0; Other Eukaryotes - 6141 (source: NCBI BLink). & (p37821|1a1c_maldo : 555.0) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 1136.0) & (original description: no original description)


Gene families : OG_42_0000419 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000419_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030827-RA
Cluster HCCA clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
A4A49_01413 No alias 1-aminocyclopropane-1-carboxylate synthase 3 0.02 Orthogroups_2024-Update
A4A49_28180 No alias 1-aminocyclopropane-1-carboxylate synthase 0.02 Orthogroups_2024-Update
A4A49_38026 No alias 1-aminocyclopropane-1-carboxylate synthase 0.03 Orthogroups_2024-Update
At3g49700 No alias 1-aminocyclopropane-1-carboxylate synthase 9... 0.04 Orthogroups_2024-Update
At4g08040 No alias 1-aminocyclopropane-1-carboxylate synthase 11... 0.02 Orthogroups_2024-Update
Brara.B03968.1 No alias EC_4.4 carbon-sulfur lyase &... 0.03 Orthogroups_2024-Update
Brara.H01734.1 No alias EC_4.4 carbon-sulfur lyase &... 0.03 Orthogroups_2024-Update
GRMZM2G164405 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.03 Orthogroups_2024-Update
GRMZM5G894619 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.04 Orthogroups_2024-Update
Glyma.08G018000 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.04 Orthogroups_2024-Update
Glyma.16G032200 No alias ACC synthase 1 0.02 Orthogroups_2024-Update
LOC_Os01g09700 No alias aminotransferase, classes I and II, domain containing... 0.02 Orthogroups_2024-Update
MA_17005g0010 No alias (q00257|1a12_cucma : 566.0)... 0.03 Orthogroups_2024-Update
PSME_00048891-RA No alias (q00257|1a12_cucma : 494.0)... 0.03 Orthogroups_2024-Update
Potri.002G163700 No alias ACC synthase 1 0.03 Orthogroups_2024-Update
Sobic.010G020800.1 No alias EC_4.4 carbon-sulfur lyase 0.04 Orthogroups_2024-Update
Sopen03g007700 No alias Aminotransferase class I and II 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA InterProScan predictions
MF GO:0030170 pyridoxal phosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 82 462
No external refs found!