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  5. PSME_00030829-RA

PSME_00030829-RA


Description : (at5g54510 : 861.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lqm5|gh31_orysa : 768.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (reliability: 1722.0) & (original description: no original description)


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030829-RA

Target Alias Description ECC score Gene Family Method Actions
110439 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
427552 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
A4A49_37324 No alias indole-3-acetic acid-amido synthetase gh3.6 0.02 Orthogroups_2024-Update
A4A49_37779 No alias jasmonic acid-amido synthetase jar1 0.03 Orthogroups_2024-Update
At5g13360 No alias Auxin-responsive GH3 family protein... 0.03 Orthogroups_2024-Update
Brara.B01373.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Brara.E01559.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.I05218.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.J02099.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K00646.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G053338 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.13G284600 No alias Auxin-responsive GH3 family protein 0.04 Orthogroups_2024-Update
MA_66253g0010 No alias (at5g54510 : 182.0) Encodes an IAA-amido synthase that... 0.07 Orthogroups_2024-Update
PSME_00011575-RA No alias (at2g14960 : 234.0) encodes a protein similar to... 0.05 Orthogroups_2024-Update
Potri.002G206400 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.03 Orthogroups_2024-Update
Potri.007G050300 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Sobic.005G134200.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Solyc05g050290 No alias LOW QUALITY:Auxin-responsive GH3 family protein (AHRD... 0.04 Orthogroups_2024-Update
Sopen07g026580 No alias GH3 auxin-responsive promoter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 21 576
No external refs found!