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  5. PSME_00030838-RA

PSME_00030838-RA


Description : (at2g45600 : 256.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G45610.1); Has 9264 Blast hits to 9243 proteins in 1540 species: Archae - 114; Bacteria - 5273; Metazoa - 690; Fungi - 865; Plants - 1337; Viruses - 3; Other Eukaryotes - 982 (source: NCBI BLink). & (q6l545|gid1_orysa : 161.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 512.0) & (original description: no original description)


Gene families : OG_42_0000013 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030838-RA
Cluster HCCA clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G158000 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G013180.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU0Hr1G019680.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G037610.1 No alias Unknown function 0.06 Orthogroups_2024-Update
HORVU2Hr1G025380.7 No alias Unknown function 0.06 Orthogroups_2024-Update
HORVU5Hr1G068140.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G228600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G394900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.003G065600.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G083400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen01g050740 No alias alpha/beta hydrolase fold 0.04 Orthogroups_2024-Update
Sopen06g011280 No alias alpha/beta hydrolase fold 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 85 309
No external refs found!