1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen06g003060

Sopen06g003060


Description : MYB-CC type transfactor, LHEQLE motif


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g003060
Cluster HCCA clusters: Cluster_408

Target Alias Description ECC score Gene Family Method Actions
441930 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
AC234155.1_FG002 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G047920.4 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Mp4g01560.1 No alias G2-like GARP transcription factor 0.02 Orthogroups_2024-Update
PSME_00007589-RA No alias (at2g40260 : 115.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00007590-RA No alias (at2g38300 : 112.0) myb-like HTH transcriptional... 0.03 Orthogroups_2024-Update
Pp1s60_59V6 No alias myb-cc type transfactor 0.02 Orthogroups_2024-Update
Pp1s74_161V6 No alias transfactor-like protein 0.03 Orthogroups_2024-Update
Seita.6G158900.1 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 251 302
IPR025756 Myb_CC_LHEQLE 334 381
No external refs found!