1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00030901-RA

PSME_00030901-RA


Description : (at1g14560 : 364.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: endomembrane system, mitochondrial inner membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Graves disease carrier protein (InterPro:IPR002167); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT4G26180.1); Has 25798 Blast hits to 13799 proteins in 460 species: Archae - 0; Bacteria - 2; Metazoa - 10868; Fungi - 7493; Plants - 4688; Viruses - 0; Other Eukaryotes - 2747 (source: NCBI BLink). & (p29518|bt1_maize : 116.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 728.0) & (original description: no original description)


Gene families : OG_42_0003079 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003079_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030901-RA
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
A4A49_30714 No alias mitochondrial adenine nucleotide transporter adnt1 0.03 Orthogroups_2024-Update
Pp1s357_30V6 No alias grave disease carrier 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051321 meiotic cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 251 354
IPR018108 Mitochondrial_sb/sol_carrier 359 459
IPR018108 Mitochondrial_sb/sol_carrier 156 242
No external refs found!