Description : (at3g28345 : 696.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 694.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1392.0) & (original description: no original description)
Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00030919-RA | |
Cluster | HCCA clusters: Cluster_39 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
410515 | No alias | ATP binding cassette subfamily B19 | 0.02 | Orthogroups_2024-Update | |
A4A49_25017 | No alias | abc transporter b family member 9 | 0.03 | Orthogroups_2024-Update | |
At3g28390 | No alias | ABC transporter B family member 18... | 0.03 | Orthogroups_2024-Update | |
Bradi2g20177 | No alias | P-glycoprotein 11 | 0.03 | Orthogroups_2024-Update | |
Brara.J00114.1 | No alias | subfamily ABCB transporter | 0.03 | Orthogroups_2024-Update | |
Glyma.17G041400 | No alias | P-glycoprotein 11 | 0.03 | Orthogroups_2024-Update | |
Glyma.17G259100 | No alias | P-glycoprotein 13 | 0.03 | Orthogroups_2024-Update | |
Glyma.18G154200 | No alias | ABC transporter family protein | 0.02 | Orthogroups_2024-Update | |
Mp2g11920.1 | No alias | subfamily ABCB transporter | 0.02 | Orthogroups_2024-Update | |
PSME_00015619-RA | No alias | (q6yuu5|mdr_orysa : 820.0) Putative multidrug resistance... | 0.05 | Orthogroups_2024-Update | |
PSME_00020852-RA | No alias | (at3g28345 : 1431.0) ABC transporter family protein;... | 0.03 | Orthogroups_2024-Update | |
PSME_00030389-RA | No alias | (at4g25960 : 993.0) P-glycoprotein 2 (PGP2); FUNCTIONS... | 0.03 | Orthogroups_2024-Update | |
Potri.017G081100 | No alias | ATP binding cassette subfamily B19 | 0.03 | Orthogroups_2024-Update | |
Potri.017G085000 | No alias | ABC transporter family protein | 0.03 | Orthogroups_2024-Update | |
Potri.018G141400 | No alias | ABC transporter family protein | 0.03 | Orthogroups_2024-Update | |
Pp1s173_145V6 | No alias | multidrug resistance protein | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
CC | GO:0016021 | integral component of membrane | IEA | InterProScan predictions |
MF | GO:0016887 | ATPase activity | IEA | InterProScan predictions |
MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEA | InterProScan predictions |
BP | GO:0055085 | transmembrane transport | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Predicted GO |
MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0033897 | ribonuclease T2 activity | IEP | Predicted GO |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Predicted GO |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
No external refs found! |