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  5. Sopen06g003130

Sopen06g003130


Description : Leucine Rich repeats (2 copies)


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g003130
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Brara.K01468.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.08G205100 No alias receptor like protein 40 0.03 Orthogroups_2024-Update
Glyma.13G227800 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
Glyma.14G173300 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
LOC_Os01g04070 No alias verticillium wilt disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.011G054500 No alias receptor like protein 6 0.02 Orthogroups_2024-Update
Seita.2G052800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G071200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G076600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc01g016370 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 432 491
IPR001611 Leu-rich_rpt 71 131
IPR013210 LRR_N_plant-typ 29 67
IPR001611 Leu-rich_rpt 504 526
IPR001611 Leu-rich_rpt 668 689
No external refs found!