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  5. PSME_00031049-RA

PSME_00031049-RA


Description : "(at5g23190 : 287.0) cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.; ""cytochrome P450, family 86, subfamily B, polypeptide 1"" (CYP86B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: very long-chain fatty acid biosynthetic process, suberin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G08250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 574.0) & (original description: no original description)"


Gene families : OG_42_0000018 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00031049-RA
Cluster HCCA clusters: Cluster_522

Target Alias Description ECC score Gene Family Method Actions
A4A49_02082 No alias cytochrome p450 94b1 0.02 Orthogroups_2024-Update
A4A49_10787 No alias alkane hydroxylase mah1 0.04 Orthogroups_2024-Update
A4A49_24652 No alias cytochrome p450 86a1 0.02 Orthogroups_2024-Update
At2g21910 No alias Cytochrome P450, family 96, subfamily A, polypeptide 5... 0.04 Orthogroups_2024-Update
At2g23180 No alias Cytochrome P450, family 96, subfamily A, polypeptide 1... 0.03 Orthogroups_2024-Update
At5g02900 No alias Cytochrome P450, family 96, subfamily A, polypeptide 13... 0.02 Orthogroups_2024-Update
Bradi4g42540 No alias cytochrome P450, family 94, subfamily C, polypeptide 1 0.07 Orthogroups_2024-Update
Brara.A00062.1 No alias mid-chain alkane hydroxylase *(MAH1) & EC_1.14... 0.03 Orthogroups_2024-Update
Brara.B02561.1 No alias fatty acyl omega-hydroxylase & EC_1.14 oxidoreductase... 0.03 Orthogroups_2024-Update
Brara.C04185.1 No alias very-long-chain fatty acyl omega-hydroxylase & EC_1.14... 0.02 Orthogroups_2024-Update
Brara.F01665.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.03 Orthogroups_2024-Update
Brara.I05639.1 No alias fatty acyl omega-hydroxylase & EC_1.14 oxidoreductase... 0.02 Orthogroups_2024-Update
GRMZM2G091822 No alias cytochrome P450, family 704, subfamily B, polypeptide 1 0.02 Orthogroups_2024-Update
GRMZM2G164074 No alias cytochrome P450, family 94, subfamily B, polypeptide 3 0.03 Orthogroups_2024-Update
Glyma.05G003100 No alias cytochrome P450, family 96, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
HORVU4Hr1G064570.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Kfl00171_0160 kfl00171_0160_v1.1 "(at2g45970 : 402.0) Encodes a member of the CYP86A... 0.04 Orthogroups_2024-Update
LOC_Os01g59000 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g59050 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g44654 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g04630 No alias cytochrome P450 protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g04640 No alias cytochrome P450 protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g04290 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
MA_10435470g0020 No alias "(at2g45510 : 331.0) member of CYP704A; ""cytochrome... 0.03 Orthogroups_2024-Update
MA_20022g0010 No alias "(at2g45510 : 476.0) member of CYP704A; ""cytochrome... 0.04 Orthogroups_2024-Update
MA_7127108g0010 No alias "(at5g23190 : 208.0) cytochrome P450 CYP86B1, nuclear... 0.03 Orthogroups_2024-Update
PSME_00009330-RA No alias "(at2g45510 : 464.0) member of CYP704A; ""cytochrome... 0.04 Orthogroups_2024-Update
PSME_00025657-RA No alias "(at2g45510 : 436.0) member of CYP704A; ""cytochrome... 0.05 Orthogroups_2024-Update
PSME_00028213-RA No alias "(at2g45510 : 430.0) member of CYP704A; ""cytochrome... 0.02 Orthogroups_2024-Update
PSME_00035399-RA No alias "(at5g63450 : 226.0) member of CYP94B; ""cytochrome... 0.06 Orthogroups_2024-Update
PSME_00050874-RA No alias "(at5g23190 : 287.0) cytochrome P450 CYP86B1, nuclear... 0.02 Orthogroups_2024-Update
PSME_00054502-RA No alias "(at5g63450 : 220.0) member of CYP94B; ""cytochrome... 0.02 Orthogroups_2024-Update
Potri.003G129100 No alias cytochrome P450, family 86, subfamily A, polypeptide 7 0.02 Orthogroups_2024-Update
Potri.004G185300 No alias cytochrome P450, family 94, subfamily C, polypeptide 1 0.02 Orthogroups_2024-Update
Potri.010G236700 No alias cytochrome P450, family 94, subfamily C, polypeptide 1 0.04 Orthogroups_2024-Update
Potri.012G131201 No alias cytochrome P450, family 704, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
Potri.014G085800 No alias cytochrome P450, family 86, subfamily A, polypeptide 8 0.02 Orthogroups_2024-Update
Potri.015G086900 No alias cytochrome P450, family 96, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
Pp1s307_4V6 No alias cytochrome p450 0.01 Orthogroups_2024-Update
Pp1s332_42V6 No alias cytochrome p450 0.02 Orthogroups_2024-Update
Seita.3G299800.1 No alias jasmonoyl-amino acid hydroxylase *(CYP94B) & EC_1.14... 0.04 Orthogroups_2024-Update
Seita.5G352100.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Seita.5G388600.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.02 Orthogroups_2024-Update
Seita.7G314800.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Seita.7G323700.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.03 Orthogroups_2024-Update
Seita.9G347500.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
Sobic.005G037000.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.02 Orthogroups_2024-Update
Sobic.008G036000.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.02 Orthogroups_2024-Update
Solyc01g094120 No alias Cytochrome P450 family protein (AHRD V3.3 *** A0A061DTZ5_THECC) 0.02 Orthogroups_2024-Update
Solyc01g094140 No alias Cytochrome P450 family protein (AHRD V3.3 *** B9IC22_POPTR) 0.03 Orthogroups_2024-Update
Solyc06g074420 No alias Cytochrome P450 family protein (AHRD V3.3 *** B9HQW0_POPTR) 0.03 Orthogroups_2024-Update
Solyc08g081220 No alias Cytochrome P450 (AHRD V3.3 *** A0A103XJH9_CYNCS) 0.04 Orthogroups_2024-Update
Solyc11g065770 No alias Cytochrome P450, putative (AHRD V3.3 *** B9S4U7_RICCO) 0.02 Orthogroups_2024-Update
Sopen01g038530 No alias Cytochrome P450 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 52 326
No external refs found!