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Description : (at3g53360 : 508.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39530.1); Has 50551 Blast hits to 14033 proteins in 266 species: Archae - 0; Bacteria - 13; Metazoa - 180; Fungi - 93; Plants - 49461; Viruses - 0; Other Eukaryotes - 804 (source: NCBI BLink). & (q76c99|rf1_orysa : 152.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1016.0) & (original description: no original description)
Gene families : OG_42_0126504 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00031063-RA | |
| Cluster | HCCA clusters: Cluster_210 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 457 | 480 |
| IPR002885 | Pentatricopeptide_repeat | 251 | 277 |
| IPR002885 | Pentatricopeptide_repeat | 657 | 681 |
| IPR002885 | Pentatricopeptide_repeat | 279 | 327 |
| IPR002885 | Pentatricopeptide_repeat | 179 | 223 |
| IPR002885 | Pentatricopeptide_repeat | 481 | 528 |
| IPR002885 | Pentatricopeptide_repeat | 381 | 428 |
| IPR002885 | Pentatricopeptide_repeat | 583 | 630 |
| No external refs found! |