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  5. PSME_00031262-RA

PSME_00031262-RA


Description : (at2g41740 : 202.0) Encodes a protein with high homology to animal villin.; villin 2 (VLN2); FUNCTIONS IN: actin binding, protein binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gelsolin (InterPro:IPR007122), Villin headpiece (InterPro:IPR003128), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: villin 3 (TAIR:AT3G57410.1); Has 3753 Blast hits to 2353 proteins in 268 species: Archae - 0; Bacteria - 52; Metazoa - 2426; Fungi - 285; Plants - 242; Viruses - 2; Other Eukaryotes - 746 (source: NCBI BLink). & (reliability: 404.0) & (original description: no original description)


Gene families : OG_42_0000618 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000618_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00031262-RA
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Bradi2g35467 No alias villin-like 1 0.02 Orthogroups_2024-Update
Brara.E01324.1 No alias villin actin-crosslinking factor 0.03 Orthogroups_2024-Update
Mp7g09750.1 No alias villin actin-crosslinking factor 0.02 Orthogroups_2024-Update
PSME_00009538-RA No alias (at2g41740 : 416.0) Encodes a protein with high homology... 0.05 Orthogroups_2024-Update
PSME_00029798-RA No alias (at2g41740 : 395.0) Encodes a protein with high homology... 0.04 Orthogroups_2024-Update
PSME_00035890-RA No alias (at2g41740 : 258.0) Encodes a protein with high homology... 0.05 Orthogroups_2024-Update
Sopen04g007880 No alias Gelsolin repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 74 127
No external refs found!