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  5. PSME_00031287-RA

PSME_00031287-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00031287-RA
Cluster HCCA clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
MA_41213g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00013080-RA No alias (at5g33406 : 95.1) hAT dimerisation domain-containing... 0.04 Orthogroups_2024-Update
PSME_00022081-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00041319-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00052149-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
InterPro domains Description Start Stop
IPR007021 DUF659 10 77
No external refs found!