Description : (p17514|chiq_tobac : 250.0) Acidic endochitinase Q precursor (EC 3.2.1.14) (Pathogenesis-related protein Q) (PR-Q) - Nicotiana tabacum (Common tobacco) & (at3g12500 : 228.0) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.; basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 456.0) & (original description: no original description)
Gene families : OG_42_0000472 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000472_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00031474-RA | |
Cluster | HCCA clusters: Cluster_124 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_00786 | No alias | acidic endochitinase q | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G062030.1 | No alias | basic chitinase *(CHIB) | 0.02 | Orthogroups_2024-Update | |
PSME_00050349-RA | No alias | (p52403|chi1_soltu : 337.0) Endochitinase 1 precursor... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004568 | chitinase activity | IEA | InterProScan predictions |
BP | GO:0006032 | chitin catabolic process | IEA | InterProScan predictions |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
BP | GO:0006351 | transcription, DNA-templated | IEP | Predicted GO |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Predicted GO |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Predicted GO |
MF | GO:0097747 | RNA polymerase activity | IEP | Predicted GO |
No external refs found! |