Description : (at3g23330 : 207.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 (TAIR:AT3G12770.1); Has 38045 Blast hits to 13879 proteins in 261 species: Archae - 0; Bacteria - 10; Metazoa - 50; Fungi - 109; Plants - 37267; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (q76c99|rf1_orysa : 84.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 414.0) & (original description: no original description)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00031504-RA | |
Cluster | HCCA clusters: Cluster_246 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
102435 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | Orthogroups_2024-Update | |
106129 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
131641 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | Orthogroups_2024-Update | |
27025 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | Orthogroups_2024-Update | |
51647 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
74388 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
89588 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
93575 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
97289 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.04 | Orthogroups_2024-Update | |
Glyma.19G202500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU0Hr1G018170.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g10090 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_10429837g0010 | No alias | (at1g11290 : 623.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
MA_2473g0010 | No alias | (at3g12770 : 597.0) Encodes a pentatricopeptide repeat... | 0.04 | Orthogroups_2024-Update | |
MA_27147g0010 | No alias | (at3g49170 : 606.0) embryo defective 2261 (EMB2261);... | 0.03 | Orthogroups_2024-Update | |
MA_519985g0010 | No alias | (at3g03580 : 679.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
MA_73205g0010 | No alias | (at2g13600 : 457.0) Pentatricopeptide repeat (PPR)... | 0.06 | Orthogroups_2024-Update | |
MA_74986g0020 | No alias | (at4g02750 : 590.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
PSME_00007181-RA | No alias | (at3g03580 : 567.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
PSME_00024026-RA | No alias | (at4g20770 : 565.0) Pentatricopeptide repeat (PPR)... | 0.05 | Orthogroups_2024-Update | |
PSME_00054022-RA | No alias | (at1g68930 : 531.0) pentatricopeptide (PPR)... | 0.05 | Orthogroups_2024-Update | |
Sopen05g007940 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005622 | intracellular | IEP | Predicted GO |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Predicted GO |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
No external refs found! |