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  5. PSME_00031552-RA

PSME_00031552-RA


Description : (at3g51280 : 406.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G48850.1); Has 898 Blast hits to 725 proteins in 125 species: Archae - 8; Bacteria - 246; Metazoa - 0; Fungi - 4; Plants - 180; Viruses - 0; Other Eukaryotes - 460 (source: NCBI BLink). & (reliability: 812.0) & (original description: no original description)


Gene families : OG_42_0000695 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000695_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00031552-RA

Target Alias Description ECC score Gene Family Method Actions
80159 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
90227 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
At4g20900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein... 0.09 Orthogroups_2024-Update
Bradi3g14297 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 Orthogroups_2024-Update
Brara.K01812.1 No alias regulatory protein *(TDM1) of meiosis-I to meiosis-II transition 0.01 Orthogroups_2024-Update
GRMZM2G442170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G355900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G075210.1 No alias regulatory protein *(SDI) of sulfate homeostasis 0.02 Orthogroups_2024-Update
LOC_Os08g03620 No alias tetratricopeptide repeat domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10429050g0010 No alias (at1g04770 : 247.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
MA_903054g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00026013-RA No alias (at3g51280 : 275.0) Tetratricopeptide repeat (TPR)-like... 0.05 Orthogroups_2024-Update
PSME_00026014-RA No alias (at3g51280 : 272.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Potri.003G177600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004057 arginyltransferase activity IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
InterPro domains Description Start Stop
IPR001440 TPR_1 295 326
No external refs found!