1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen06g003480

Sopen06g003480


Description : WD domain, G-beta repeat


Gene families : OG_42_0006398 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006398_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g003480
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Bradi1g08810 No alias Transducin/WD40 repeat-like superfamily protein 0.07 Orthogroups_2024-Update
Brara.I05540.1 No alias component *(TRM82) of TRM8-TRM82 tRNA... 0.02 Orthogroups_2024-Update
Cre08.g374800 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Kfl00181_0240 kfl00181_0240_v1.1 (at1g03110 : 208.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
Potri.005G211600 No alias Transducin/WD40 repeat-like superfamily protein 0.07 Orthogroups_2024-Update
Sobic.001G091900.1 No alias component *(TRM82) of TRM8-TRM82 tRNA... 0.02 Orthogroups_2024-Update
Solyc06g008700 No alias tRNA (guanine-N(7)-)-methyltransferase non-catalytic... 0.12 Orthogroups_2024-Update
evm.model.tig00001278.11 No alias (at1g03110 : 103.0) Transducin/WD40 repeat-like... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 61 89
IPR001680 WD40_repeat 151 180
IPR001680 WD40_repeat 198 234
No external refs found!