1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00031600-RA

PSME_00031600-RA


Description : (at1g19715 : 97.8) Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1). & (reliability: 195.6) & (original description: no original description)


Gene families : OG_42_0000123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00031600-RA
Cluster HCCA clusters: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
At1g52000 No alias Jacalin-related lectin 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU23] 0.02 Orthogroups_2024-Update
At3g16450 No alias Jacalin-related lectin 33... 0.02 Orthogroups_2024-Update
Brara.D02381.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H00186.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.14G194450 No alias Mannose-binding lectin superfamily protein 0.03 Orthogroups_2024-Update
PSME_00002592-RA No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
PSME_00021404-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00025875-RA No alias (at1g19715 : 86.3) Mannose-binding lectin superfamily... 0.04 Orthogroups_2024-Update
PSME_00038490-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Sobic.001G344800.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 19 163
No external refs found!