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  5. PSME_00031601-RA

PSME_00031601-RA


Description : (at1g52100 : 101.0) Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot, hypocotyl; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT5G35950.1). & (reliability: 202.0) & (original description: no original description)


Gene families : OG_42_0000123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00031601-RA
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
17953 No alias Mannose-binding lectin superfamily protein 0.03 Orthogroups_2024-Update
At1g52100 No alias Mannose-binding lectin superfamily protein... 0.03 Orthogroups_2024-Update
Brara.C02011.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F00219.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H00188.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU1Hr1G075520.2 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os10g18820 No alias dirigent, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g05020 No alias jasmonate-induced protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00002592-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00025875-RA No alias (at1g19715 : 86.3) Mannose-binding lectin superfamily... 0.03 Orthogroups_2024-Update
PSME_00053562-RA No alias (at1g19715 : 85.9) Mannose-binding lectin superfamily... 0.04 Orthogroups_2024-Update
Potri.002G030100 No alias Mannose-binding lectin superfamily protein 0.03 Orthogroups_2024-Update
Seita.8G040500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G372400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G168800.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 117 251
IPR001229 Jacalin-like_lectin_dom 272 416
No external refs found!