1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00031604-RA

PSME_00031604-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000662 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00031604-RA
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
MA_878966g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00000199-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00001667-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00003057-RA No alias (at3g09510 : 81.3) Ribonuclease H-like superfamily... 0.01 Orthogroups_2024-Update
PSME_00005539-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00025464-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00026657-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00036326-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0018196 peptidyl-asparagine modification IEP Predicted GO
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 172 246
No external refs found!