1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00031623-RA

PSME_00031623-RA


Description : (at3g24500 : 142.0) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is specifically elevated in response to pathogen infection, salinity, drought, heat, hydrogen peroxide, and application of abscisic acid or salicylic acid. Constitutive expression enhances the tolerance of transgenic plants to various biotic and abiotic stresses.; multiprotein bridging factor 1C (MBF1C); FUNCTIONS IN: transcription coactivator activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1B (TAIR:AT3G58680.1). & (reliability: 284.0) & (original description: no original description)


Gene families : OG_42_0001682 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001682_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00031623-RA
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Brara.G00628.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G126100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G178500.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR013729 MBF1_N 37 105
IPR001387 Cro/C1-type_HTH 110 161
No external refs found!