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Description : (at5g12100 : 227.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 197.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 418.0) & (original description: no original description)
Gene families : OG_42_0006661 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006661_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00031954-RA | |
| Cluster | HCCA clusters: Cluster_22 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003774 | motor activity | IEP | Predicted GO |
| BP | GO:0006275 | regulation of DNA replication | IEP | Predicted GO |
| BP | GO:0008156 | negative regulation of DNA replication | IEP | Predicted GO |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0020037 | heme binding | IEP | Predicted GO |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0045005 | DNA-dependent DNA replication maintenance of fidelity | IEP | Predicted GO |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
| BP | GO:0048478 | replication fork protection | IEP | Predicted GO |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | Predicted GO |
| BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | Predicted GO |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0090329 | regulation of DNA-dependent DNA replication | IEP | Predicted GO |
| BP | GO:2000104 | negative regulation of DNA-dependent DNA replication | IEP | Predicted GO |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 440 | 469 |
| IPR002885 | Pentatricopeptide_repeat | 405 | 432 |
| IPR002885 | Pentatricopeptide_repeat | 371 | 399 |
| IPR002885 | Pentatricopeptide_repeat | 146 | 185 |
| IPR002885 | Pentatricopeptide_repeat | 196 | 240 |
| IPR002885 | Pentatricopeptide_repeat | 23 | 70 |
| IPR002885 | Pentatricopeptide_repeat | 296 | 344 |
| IPR002885 | Pentatricopeptide_repeat | 87 | 136 |
| No external refs found! |