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  5. PSME_00032105-RA

PSME_00032105-RA


Description : (at1g14190 : 453.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G14185.1); Has 12034 Blast hits to 11141 proteins in 1120 species: Archae - 6; Bacteria - 4075; Metazoa - 1036; Fungi - 1877; Plants - 336; Viruses - 6; Other Eukaryotes - 4698 (source: NCBI BLink). & (reliability: 906.0) & (original description: no original description)


Gene families : OG_42_0000273 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00032105-RA
Cluster HCCA clusters: Cluster_435

Target Alias Description ECC score Gene Family Method Actions
405960 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Orthogroups_2024-Update
A4A49_18141 No alias protein hothead 0.04 Orthogroups_2024-Update
At1g72970 No alias HTH [Source:UniProtKB/TrEMBL;Acc:A0A178WG21] 0.03 Orthogroups_2024-Update
Bradi4g28870 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Orthogroups_2024-Update
Glyma.07G009900 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Orthogroups_2024-Update
Glyma.13G350300 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Orthogroups_2024-Update
LOC_Os02g45530 No alias HOTHEAD precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g31030 No alias HOTHEAD precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g19930 No alias HOTHEAD precursor, putative, expressed 0.04 Orthogroups_2024-Update
MA_111884g0010 No alias (at1g14190 : 311.0) Glucose-methanol-choline (GMC)... 0.04 Orthogroups_2024-Update
MA_137064g0010 No alias (at1g14190 : 357.0) Glucose-methanol-choline (GMC)... 0.05 Orthogroups_2024-Update
MA_138671g0010 No alias (at5g51950 : 104.0) Glucose-methanol-choline (GMC)... 0.04 Orthogroups_2024-Update
MA_423598g0010 No alias (at1g14190 : 209.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
MA_9196249g0010 No alias (at1g72970 : 113.0) Originally identified as a mutation... 0.03 Orthogroups_2024-Update
PSME_00032973-RA No alias (at1g12570 : 369.0) Glucose-methanol-choline (GMC)... 0.05 Orthogroups_2024-Update
PSME_00041186-RA No alias (at1g12570 : 451.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00048296-RA No alias (at1g14190 : 439.0) Glucose-methanol-choline (GMC)... 0.05 Orthogroups_2024-Update
PSME_00052334-RA No alias (at1g12570 : 469.0) Glucose-methanol-choline (GMC)... 0.05 Orthogroups_2024-Update
PSME_00052596-RA No alias (at1g14190 : 172.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00054443-RA No alias (at1g12570 : 421.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
Potri.003G039000 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Seita.1G271600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc06g035580 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 406 542
IPR000172 GMC_OxRdtase_N 59 345
No external refs found!