PSME_00032119-RA


Description : (at4g24130 : 139.0) Protein of unknown function, DUF538; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT5G46230.1); Has 362 Blast hits to 362 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description)


Gene families : OG_42_0000291 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00032119-RA
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
Bradi2g26430 No alias Protein of unknown function, DUF538 0.02 Orthogroups_2024-Update
Bradi4g04590 No alias Protein of unknown function, DUF538 0.03 Orthogroups_2024-Update
Brara.A01416.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
Brara.K00741.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
HORVU5Hr1G073700.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
HORVU5Hr1G073710.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
LOC_Os07g02920 No alias DUF538 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_4522g0020 No alias (at4g24130 : 139.0) Protein of unknown function, DUF538;... 0.02 Orthogroups_2024-Update
Mp7g02720.1 No alias no hits & (original description: none) 0.01 Orthogroups_2024-Update
Potri.004G064700 No alias Protein of unknown function, DUF538 0.02 Orthogroups_2024-Update
Seita.3G334000.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
Seita.9G190900.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.04 Orthogroups_2024-Update
Sobic.002G012700.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
Sobic.002G013000.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.03 Orthogroups_2024-Update
Sobic.002G089100.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
Sobic.003G022200.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.03 Orthogroups_2024-Update
Sobic.010G117500.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
Sobic.010G117800.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
Sobic.010G159100.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.05 Orthogroups_2024-Update
Solyc01g100750 No alias LOW QUALITY:plant/protein (Protein of unknown function,... 0.04 Orthogroups_2024-Update
Solyc01g100770 No alias LOW QUALITY:plant/protein (Protein of unknown function,... 0.03 Orthogroups_2024-Update
Sopen00g008360 No alias Protein of unknown function, DUF538 0.04 Orthogroups_2024-Update
Sopen01g044250 No alias Protein of unknown function, DUF538 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007493 DUF538 51 162
No external refs found!