PSME_00032194-RA

Description : (at4g17500 : 100.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (q40479|erf2_tobac : 94.4) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (reliability: 200.0) & (original description: no original description)

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00032194-RA

Target	Alias	Description	ECC score	Gene Family Method
At1g78080	No alias	Ethylene-responsive transcription factor RAP2-4...	0.02	Orthogroups_2024-Update
Brara.D02714.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Brara.G00521.1	No alias	subgroup ERF-IX transcription factor	0.01	Orthogroups_2024-Update
Brara.G02420.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Brara.J02251.1	No alias	cutin and suberin biosynthesis transcription factor...	0.02	Orthogroups_2024-Update
Glyma.20G195900	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
LOC_Os02g54160	No alias	AP2 domain containing protein, expressed	0.01	Orthogroups_2024-Update
MA_446533g0010	No alias	(at4g16750 : 126.0) encodes a member of the DREB...	0.01	Orthogroups_2024-Update
MA_8984558g0010	No alias	(at1g74930 : 107.0) encodes a member of the DREB...	0.01	Orthogroups_2024-Update
Mp7g13760.1	No alias	transcription factor (DREB)	0.01	Orthogroups_2024-Update
PSME_00056972-RA	No alias	(at4g17490 : 92.0) Encodes a member of the ERF (ethylene...	0.01	Orthogroups_2024-Update
Potri.002G141200	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Potri.006G138800	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Potri.014G046800	No alias	ethylene-responsive element binding factor 13	0.01	Orthogroups_2024-Update
Potri.014G055700	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Potri.016G053200	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Pp1s14_196V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s276_3V6	No alias	transcriptional factor	0.05	Orthogroups_2024-Update
Pp1s296_32V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Pp1s41_212V6	No alias	ap2 erf domain-containing transcription factor	0.01	Orthogroups_2024-Update
Seita.2G430400.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.01	Orthogroups_2024-Update
Sobic.006G168200.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Sobic.006G259000.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G077100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G077200.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc02g090800	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	126	176

External Links

No external refs found!

PSME_00032194-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation