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  5. PSME_00032260-RA

PSME_00032260-RA


Description : (at3g50170 : 107.0) Plant protein of unknown function (DUF247); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50120.1); Has 905 Blast hits to 897 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 905; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)


Gene families : OG_42_0000095 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00032260-RA
Cluster HCCA clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
At2g28580 No alias Plant protein of unknown function (DUF247)... 0.04 Orthogroups_2024-Update
At2g44930 No alias Expressed protein [Source:UniProtKB/TrEMBL;Acc:O22159] 0.03 Orthogroups_2024-Update
At3g60470 No alias Transmembrane protein, putative (DUF247)... 0.03 Orthogroups_2024-Update
Bradi3g57350 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Bradi5g23932 No alias Plant protein of unknown function (DUF247) 0.02 Orthogroups_2024-Update
Brara.B02940.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.H00397.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.06G304100 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.06G304300 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.07G111000 No alias Plant protein of unknown function (DUF247) 0.02 Orthogroups_2024-Update
Glyma.10G266500 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Glyma.11G052900 No alias Plant protein of unknown function (DUF247) 0.05 Orthogroups_2024-Update
HORVU4Hr1G011040.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G089850.3 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os11g33394 No alias plant protein of unknown function domain containing... 0.03 Orthogroups_2024-Update
MA_10425807g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.001G071400 No alias Plant protein of unknown function (DUF247) 0.02 Orthogroups_2024-Update
Potri.003G181800 No alias Plant protein of unknown function (DUF247) 0.02 Orthogroups_2024-Update
Potri.005G116100 No alias Plant protein of unknown function (DUF247) 0.02 Orthogroups_2024-Update
Potri.006G043000 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.006G251500 No alias Function unknown 0.02 Orthogroups_2024-Update
Potri.008G106100 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.016G039300 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.T012600 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.T087400 No alias Function unknown 0.02 Orthogroups_2024-Update
Seita.8G143800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G018400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G112400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G139600.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR004158 DUF247_pln 31 445
No external refs found!