Sopen06g003990

Description : Alpha amylase, catalytic domain

Gene families : OG_42_0001338 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001338_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g003990
Cluster	HCCA clusters: Cluster_70

Target	Alias	Description	ECC score	Gene Family Method
Brara.J00172.1	No alias	component *(ISA2) of ISA1-ISA2 isoamylase heterodimer	0.02	Orthogroups_2024-Update
GRMZM2G150796	No alias	isoamylase 3	0.02	Orthogroups_2024-Update
PSME_00029548-RA	No alias	(at4g09020 : 409.0) Encodes an isoamylase-like protein....	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	InterProScan predictions
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004193	Glyco_hydro_13_N	94	187
IPR006047	Glyco_hydro_13_cat_dom	259	374

External Links

No external refs found!