Description : ABC transporter transmembrane region
Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen06g004020 | |
Cluster | HCCA clusters: Cluster_362 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
123915 | No alias | P-glycoprotein 11 | 0.01 | Orthogroups_2024-Update | |
139408 | No alias | P-glycoprotein 20 | 0.02 | Orthogroups_2024-Update | |
233433 | No alias | ABC transporter family protein | 0.05 | Orthogroups_2024-Update | |
A4A49_01823 | No alias | putative abc transporter b family member 8 | 0.06 | Orthogroups_2024-Update | |
At1g28010 | No alias | ABC transporter B family member 14... | 0.02 | Orthogroups_2024-Update | |
Bradi1g72517 | No alias | ATP binding cassette subfamily B19 | 0.02 | Orthogroups_2024-Update | |
Brara.A01591.1 | No alias | subfamily ABCB transporter | 0.02 | Orthogroups_2024-Update | |
Brara.I02993.1 | No alias | subfamily ABCB transporter | 0.02 | Orthogroups_2024-Update | |
Brara.K00467.1 | No alias | subfamily ABCB transporter | 0.02 | Orthogroups_2024-Update | |
GRMZM5G843537 | No alias | P-glycoprotein 11 | 0.02 | Orthogroups_2024-Update | |
HORVU4Hr1G077060.4 | No alias | ABC-B-type transporter *(AMN3) & subfamily ABCB transporter | 0.04 | Orthogroups_2024-Update | |
LOC_Os01g29870 | No alias | multidrug resistance protein 9, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g50100 | No alias | ABC transporter, ATP-binding protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g50160 | No alias | MDR-like ABC transporter, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_14136g0010 | No alias | (at2g39480 : 909.0) P-glycoprotein 6 (PGP6); FUNCTIONS... | 0.02 | Orthogroups_2024-Update | |
MA_83806g0010 | No alias | (q6yuu5|mdr_orysa : 1360.0) Putative multidrug... | 0.02 | Orthogroups_2024-Update | |
MA_8945353g0010 | No alias | (at3g28860 : 432.0) Belongs to the family of ATP-binding... | 0.03 | Orthogroups_2024-Update | |
Mp3g11830.1 | No alias | auxin efflux transporter (ABCB19). subfamily ABCB transporter | 0.02 | Orthogroups_2024-Update | |
PSME_00016714-RA | No alias | (q6yuu5|mdr_orysa : 1107.0) Putative multidrug... | 0.06 | Orthogroups_2024-Update | |
PSME_00023484-RA | No alias | (at2g36910 : 1766.0) Belongs to the family of... | 0.02 | Orthogroups_2024-Update | |
PSME_00046830-RA | No alias | (at3g28345 : 1028.0) ABC transporter family protein;... | 0.05 | Orthogroups_2024-Update | |
Potri.002G187500 | No alias | ATP binding cassette subfamily B4 | 0.02 | Orthogroups_2024-Update | |
Potri.017G085000 | No alias | ABC transporter family protein | 0.02 | Orthogroups_2024-Update | |
Potri.018G141400 | No alias | ABC transporter family protein | 0.02 | Orthogroups_2024-Update | |
Seita.1G280600.1 | No alias | subfamily ABCB transporter | 0.03 | Orthogroups_2024-Update | |
Seita.5G282700.1 | No alias | subfamily ABCB transporter | 0.03 | Orthogroups_2024-Update | |
Sobic.007G163800.1 | No alias | subfamily ABCB transporter | 0.03 | Orthogroups_2024-Update | |
Solyc02g071350 | No alias | ABC transporter B family protein (AHRD V3.3 *** G7ILW7_MEDTR) | 0.03 | Orthogroups_2024-Update | |
Solyc03g005860 | No alias | ABC transporter B family protein (AHRD V3.3 *** G7ILW7_MEDTR) | 0.02 | Orthogroups_2024-Update | |
Solyc03g122050 | No alias | ABC transporter B family-like protein (AHRD V3.3 *-*... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
CC | GO:0016021 | integral component of membrane | IEA | InterProScan predictions |
MF | GO:0016887 | ATPase activity | IEA | InterProScan predictions |
MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEA | InterProScan predictions |
BP | GO:0055085 | transmembrane transport | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |