PSME_00032502-RA

Description : (at1g12570 : 436.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT5G51950.1); Has 10555 Blast hits to 10382 proteins in 1112 species: Archae - 4; Bacteria - 3926; Metazoa - 806; Fungi - 1507; Plants - 299; Viruses - 12; Other Eukaryotes - 4001 (source: NCBI BLink). & (reliability: 852.0) & (original description: no original description)

Gene families : OG_42_0000273 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00032502-RA
Cluster	HCCA clusters: Cluster_53

Target	Alias	Description	ECC score	Gene Family Method
112603	No alias	Glucose-methanol-choline (GMC) oxidoreductase family protein	0.05	Orthogroups_2024-Update
405960	No alias	Glucose-methanol-choline (GMC) oxidoreductase family protein	0.02	Orthogroups_2024-Update
427468	No alias	Glucose-methanol-choline (GMC) oxidoreductase family protein	0.03	Orthogroups_2024-Update
Glyma.07G009900	No alias	Glucose-methanol-choline (GMC) oxidoreductase family protein	0.03	Orthogroups_2024-Update
MA_10434427g0010	No alias	(at5g51950 : 292.0) Glucose-methanol-choline (GMC)...	0.03	Orthogroups_2024-Update
PSME_00032973-RA	No alias	(at1g12570 : 369.0) Glucose-methanol-choline (GMC)...	0.03	Orthogroups_2024-Update
PSME_00038869-RA	No alias	(at1g14190 : 353.0) Glucose-methanol-choline (GMC)...	0.03	Orthogroups_2024-Update
PSME_00041186-RA	No alias	(at1g12570 : 451.0) Glucose-methanol-choline (GMC)...	0.03	Orthogroups_2024-Update
PSME_00047795-RA	No alias	(at1g73050 : 409.0) Glucose-methanol-choline (GMC)...	0.03	Orthogroups_2024-Update
PSME_00048086-RA	No alias	(at1g14185 : 365.0) Glucose-methanol-choline (GMC)...	0.03	Orthogroups_2024-Update
PSME_00048296-RA	No alias	(at1g14190 : 439.0) Glucose-methanol-choline (GMC)...	0.03	Orthogroups_2024-Update
Pp1s85_157V6	No alias	glucose-methanol-choline oxidoreductase family protein	0.03	Orthogroups_2024-Update
Sobic.007G122400.1	No alias	omega-hydroxy fatty acyl dehydrogenase *(HOTHEAD)	0.06	Orthogroups_2024-Update
Solyc06g062600	No alias	Glucose-methanol-choline (GMC) oxidoreductase family...	0.04	Orthogroups_2024-Update
Sopen06g022090	No alias	GMC oxidoreductase	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEA	InterProScan predictions
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	InterProScan predictions
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003916	DNA topoisomerase activity	IEP	Predicted GO
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004650	polygalacturonase activity	IEP	Predicted GO
CC	GO:0005694	chromosome	IEP	Predicted GO
BP	GO:0006265	DNA topological change	IEP	Predicted GO
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0071103	DNA conformation change	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000172	GMC_OxRdtase_N	87	371
IPR007867	GMC_OxRtase_C	440	586

External Links

No external refs found!

PSME_00032502-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation