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  5. PSME_00032515-RA

PSME_00032515-RA


Description : (at5g60710 : 551.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G38970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1102.0) & (original description: no original description)


Gene families : OG_42_0000384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00032515-RA
Cluster HCCA clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
A4A49_36924 No alias hypothetical protein 0.02 Orthogroups_2024-Update
GRMZM2G094602 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
Glyma.11G197001 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
Mp6g08600.1 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.008G038450 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
Seita.1G237000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g076860 No alias Zinc finger (C3HC4-type RING finger) family protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 6 35
IPR002035 VWF_A 269 458
IPR032838 Vwaint_dom 633 705
No external refs found!