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  5. PSME_00032579-RA

PSME_00032579-RA


Description : (q8gu89|pdr4_orysa : 184.0) Pleiotropic drug resistance protein 4 - Oryza sativa (Rice) & (at1g15520 : 172.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description)


Gene families : OG_42_0002420 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002420_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00032579-RA
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
MA_10436632g0010 No alias (q8gu89|pdr4_orysa : 504.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00007210-RA No alias (q949g3|pdr1_nicpl : 301.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
PSME_00021101-RA No alias (q949g3|pdr1_nicpl : 395.0) Pleiotropic drug resistance... 0.05 Orthogroups_2024-Update
PSME_00023044-RA No alias (q8gu89|pdr4_orysa : 260.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 9 158
No external refs found!